WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07E11.1a.1 Sequence Name  W07E11.1a.1
Length (nt)  7329   Chromosome Location  X: 10084622-10104650
Chromosome . Primary Identifier  X Chromosome Location . Start  10084622
Chromosome Location . End  10104650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07E11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012326 W07E11.1 W07E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07E11.1a W07E11.1a 6528   X: 10084667-10084926

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1a.1 10084622 10104650 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247985   305   X: 10084622-10084926 Caenorhabditis elegans
Exon247986   622   X: 10085180-10085801 Caenorhabditis elegans
Exon247989   187   X: 10086123-10086309 Caenorhabditis elegans
Exon247992   155   X: 10086915-10087069 Caenorhabditis elegans
Exon248006   156   X: 10095534-10095689 Caenorhabditis elegans
Exon248008   273   X: 10095748-10096020 Caenorhabditis elegans
Exon248010   153   X: 10096367-10096519 Caenorhabditis elegans
Exon248012   79   X: 10096703-10096781 Caenorhabditis elegans
Exon248014   422   X: 10097391-10097812 Caenorhabditis elegans
Exon248016   163   X: 10097931-10098093 Caenorhabditis elegans
Exon248020   95   X: 10099066-10099160 Caenorhabditis elegans
Exon248022   558   X: 10099213-10099770 Caenorhabditis elegans
Exon248024   1262   X: 10099900-10101161 Caenorhabditis elegans
Exon248026   388   X: 10101207-10101594 Caenorhabditis elegans
Exon248028   156   X: 10101843-10101998 Caenorhabditis elegans
Exon248030   632   X: 10102202-10102833 Caenorhabditis elegans
Exon248032   799   X: 10102881-10103679 Caenorhabditis elegans
Exon248035   924   X: 10103727-10104650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1a.1 10084622 10104650 1

1 Sequence

Length
7329

1 Sequence Ontology Term

Identifier Name Description
transcript