WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47G6A.23b.1 Sequence Name  Y47G6A.23b.1
Length (nt)  12121   Chromosome Location  I: 3565243-3600735
Chromosome . Primary Identifier  I Chromosome Location . Start  3565243
Chromosome Location . End  3600735 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.23b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003060 lpd-3 Y47G6A.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.23b Y47G6A.23b 12063   I: 3565243-3565380

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23b.1 3565243 3600735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon7229   138   I: 3565243-3565380 Caenorhabditis elegans
Exon7231   138   I: 3567297-3567434 Caenorhabditis elegans
Exon7236   453   I: 3568220-3568672 Caenorhabditis elegans
Exon7240   660   I: 3569724-3570383 Caenorhabditis elegans
Exon7244   123   I: 3571156-3571278 Caenorhabditis elegans
Exon7248   693   I: 3571942-3572634 Caenorhabditis elegans
Exon7252   383   I: 3573354-3573736 Caenorhabditis elegans
Exon7256   685   I: 3574537-3575221 Caenorhabditis elegans
Exon7260   1513   I: 3576154-3577666 Caenorhabditis elegans
Exon7264   822   I: 3578714-3579535 Caenorhabditis elegans
Exon7268   96   I: 3580196-3580291 Caenorhabditis elegans
Exon7272   419   I: 3580341-3580759 Caenorhabditis elegans
Exon7276   660   I: 3581847-3582506 Caenorhabditis elegans
Exon7280   112   I: 3583430-3583541 Caenorhabditis elegans
Exon7284   1267   I: 3583595-3584861 Caenorhabditis elegans
Exon7288   313   I: 3585185-3585497 Caenorhabditis elegans
Exon7292   570   I: 3586719-3587288 Caenorhabditis elegans
Exon7296   183   I: 3588103-3588285 Caenorhabditis elegans
Exon7300   252   I: 3589434-3589685 Caenorhabditis elegans
Exon7304   118   I: 3590291-3590408 Caenorhabditis elegans
Exon7308   356   I: 3591006-3591361 Caenorhabditis elegans
Exon7312   120   I: 3592122-3592241 Caenorhabditis elegans
Exon7316   262   I: 3592419-3592680 Caenorhabditis elegans
Exon7320   188   I: 3593645-3593832 Caenorhabditis elegans
Exon7324   339   I: 3594612-3594950 Caenorhabditis elegans
Exon7328   323   I: 3595976-3596298 Caenorhabditis elegans
Exon7332   207   I: 3597300-3597506 Caenorhabditis elegans
Exon7338   143   I: 3598620-3598762 Caenorhabditis elegans
Exon7341   165   I: 3598810-3598974 Caenorhabditis elegans
Exon7345   192   I: 3599765-3599956 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47G6A.23b.1 3565243 3600735 -1

1 Sequence

Length
12121

1 Sequence Ontology Term

Identifier Name Description
transcript