WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y47G6A.23b Sequence Name  Y47G6A.23b
Length (nt)  12063   Chromosome Location  I: 3565243-3565380
Chromosome . Primary Identifier  I Chromosome Location . Start  3565243
Chromosome Location . End  3565380
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47G6A.23b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50138 LPD-3, isoform b 451.8 4020 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00113295
WBRNAi00066082
WBRNAi00066101
WBRNAi00001142
WBRNAi00007428
WBRNAi00056813
WBRNAi00004636
WBRNAi00004644
WBRNAi00026727
WBRNAi00084991
WBRNAi00087730
WBRNAi00113066
WBRNAi00113172
WBRNAi00113135
WBRNAi00022883
WBRNAi00024230
WBRNAi00026726
WBRNAi00081679
WBRNAi00116439
WBRNAi00004637
WBRNAi00056819
WBRNAi00024155
WBRNAi00023355
WBRNAi00023868

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.23b 3565243 3565380 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003060 lpd-3 Y47G6A.23 Caenorhabditis elegans

31 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y47G6A.23b 3565243 3565380 -1
CDS:Y47G6A.23b 3567297 3567434 -1
CDS:Y47G6A.23b 3568220 3568672 -1
CDS:Y47G6A.23b 3569724 3570383 -1
CDS:Y47G6A.23b 3571156 3571278 -1
CDS:Y47G6A.23b 3571942 3572634 -1
CDS:Y47G6A.23b 3573354 3573736 -1
CDS:Y47G6A.23b 3574537 3575221 -1
CDS:Y47G6A.23b 3576154 3577666 -1
CDS:Y47G6A.23b 3578714 3579535 -1
CDS:Y47G6A.23b 3580196 3580291 -1
CDS:Y47G6A.23b 3580341 3580759 -1
CDS:Y47G6A.23b 3581847 3582506 -1
CDS:Y47G6A.23b 3583430 3583541 -1
CDS:Y47G6A.23b 3583595 3584861 -1
CDS:Y47G6A.23b 3585185 3585497 -1
CDS:Y47G6A.23b 3586719 3587288 -1
CDS:Y47G6A.23b 3588103 3588285 -1
CDS:Y47G6A.23b 3589434 3589685 -1
CDS:Y47G6A.23b 3590291 3590408 -1
CDS:Y47G6A.23b 3591006 3591361 -1
CDS:Y47G6A.23b 3592122 3592241 -1
CDS:Y47G6A.23b 3592419 3592680 -1
CDS:Y47G6A.23b 3593645 3593832 -1
CDS:Y47G6A.23b 3594612 3594950 -1
CDS:Y47G6A.23b 3595976 3596298 -1
CDS:Y47G6A.23b 3597300 3597506 -1
CDS:Y47G6A.23b 3598620 3598762 -1
CDS:Y47G6A.23b 3598810 3598974 -1
CDS:Y47G6A.23b 3599765 3599956 -1

1 Sequence

Length
12063

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y47G6A.23b.1 Y47G6A.23b.1 12121   I: 3565243-3600735