WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14H10.3a.1 Sequence Name  C14H10.3a.1
Length (nt)  2951   Chromosome Location  X: 10220641-10228137
Chromosome . Primary Identifier  X Chromosome Location . Start  10220641
Chromosome Location . End  10228137 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007593 C14H10.3 C14H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14H10.3a C14H10.3a 2409   X: 10221182-10221387

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14H10.3a.1 10220641 10228137 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248422   747   X: 10220641-10221387 Caenorhabditis elegans
Exon248424   449   X: 10221637-10222085 Caenorhabditis elegans
Exon248427   172   X: 10222137-10222308 Caenorhabditis elegans
Exon248430   109   X: 10222371-10222479 Caenorhabditis elegans
Exon248433   399   X: 10222533-10222931 Caenorhabditis elegans
Exon248436   291   X: 10222990-10223280 Caenorhabditis elegans
Exon248439   135   X: 10223335-10223469 Caenorhabditis elegans
Exon248442   151   X: 10223519-10223669 Caenorhabditis elegans
Exon248445   156   X: 10223722-10223877 Caenorhabditis elegans
Exon248448   173   X: 10223932-10224104 Caenorhabditis elegans
Exon248451   100   X: 10224241-10224340 Caenorhabditis elegans
Exon248456   69   X: 10228069-10228137 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14H10.3a.1 10220641 10228137 -1

1 Sequence

Length
2951

1 Sequence Ontology Term

Identifier Name Description
transcript