WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14H10.2a.1 Sequence Name  C14H10.2a.1
Length (nt)  2472   Chromosome Location  X: 10242325-10252879
Chromosome . Primary Identifier  X Chromosome Location . Start  10242325
Chromosome Location . End  10252879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14H10.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007592 C14H10.2 C14H10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14H10.2a C14H10.2a 2103   X: 10242623-10242712

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C14H10.2a.1 10242325 10252879 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248469   388   X: 10242325-10242712 Caenorhabditis elegans
Exon248474   57   X: 10242758-10242814 Caenorhabditis elegans
Exon248479   225   X: 10243228-10243452 Caenorhabditis elegans
Exon248484   352   X: 10243495-10243846 Caenorhabditis elegans
Exon248489   113   X: 10243899-10244011 Caenorhabditis elegans
Exon248494   234   X: 10244059-10244292 Caenorhabditis elegans
Exon248499   168   X: 10244605-10244772 Caenorhabditis elegans
Exon248502   117   X: 10245059-10245175 Caenorhabditis elegans
Exon248506   75   X: 10245273-10245347 Caenorhabditis elegans
Exon248512   70   X: 10248292-10248361 Caenorhabditis elegans
Exon248516   92   X: 10248428-10248519 Caenorhabditis elegans
Exon248520   147   X: 10248567-10248713 Caenorhabditis elegans
Exon248524   147   X: 10248835-10248981 Caenorhabditis elegans
Exon248528   123   X: 10249200-10249322 Caenorhabditis elegans
Exon248534   73   X: 10250920-10250992 Caenorhabditis elegans
Exon248536   91   X: 10252789-10252879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C14H10.2a.1 10242325 10252879 -1

1 Sequence

Length
2472

1 Sequence Ontology Term

Identifier Name Description
transcript