WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41E7.2.2 Sequence Name  F41E7.2.2
Length (nt)  2059   Chromosome Location  X: 10273692-10278371
Chromosome . Primary Identifier  X Chromosome Location . Start  10273692
Chromosome Location . End  10278371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41E7.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009618 F41E7.2 F41E7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41E7.2 F41E7.2 1677   X: 10273901-10273963

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.2.2 10273692 10278371 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248548   99   X: 10273692-10273790 Caenorhabditis elegans
Exon248550   76   X: 10273888-10273963 Caenorhabditis elegans
Exon248552   79   X: 10274378-10274456 Caenorhabditis elegans
Exon248554   153   X: 10274530-10274682 Caenorhabditis elegans
Exon248556   161   X: 10274797-10274957 Caenorhabditis elegans
Exon248558   192   X: 10275598-10275789 Caenorhabditis elegans
Exon248560   94   X: 10275881-10275974 Caenorhabditis elegans
Exon248562   168   X: 10276029-10276196 Caenorhabditis elegans
Exon248564   98   X: 10277064-10277161 Caenorhabditis elegans
Exon248566   96   X: 10277211-10277306 Caenorhabditis elegans
Exon248568   225   X: 10277406-10277630 Caenorhabditis elegans
Exon248570   105   X: 10277706-10277810 Caenorhabditis elegans
Exon248572   513   X: 10277859-10278371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41E7.2.2 10273692 10278371 1

1 Sequence

Length
2059

1 Sequence Ontology Term

Identifier Name Description
transcript