WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49A10A.1 Sequence Name  Y49A10A.1
Length (nt)  1344   Chromosome Location  X: 10358494-10358684
Chromosome . Primary Identifier  X Chromosome Location . Start  10358494
Chromosome Location . End  10358684
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49A10A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41340 EFHC-1 52.7 447 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056988
WBRNAi00020767
WBRNAi00037281

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49A10A.1 10358494 10358684 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013028 efhc-1 Y49A10A.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49A10A.1 10358494 10358684 1
CDS:Y49A10A.1 10358915 10359101 1
CDS:Y49A10A.1 10359150 10359293 1
CDS:Y49A10A.1 10359339 10359452 1
CDS:Y49A10A.1 10359496 10359593 1
CDS:Y49A10A.1 10359637 10359746 1
CDS:Y49A10A.1 10359793 10359953 1
CDS:Y49A10A.1 10360044 10360115 1
CDS:Y49A10A.1 10360165 10360310 1
CDS:Y49A10A.1 10360355 10360475 1

1 Sequence

Length
1344

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49A10A.1.1 Y49A10A.1.1 1530   X: 10358383-10360550