WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1l.1 Sequence Name  C09D1.1l.1
Length (nt)  19833   Chromosome Location  I: 4035893-4078127
Chromosome . Primary Identifier  I Chromosome Location . Start  4035893
Chromosome Location . End  4078127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1l C09D1.1l 19833   I: 4035893-4035942

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1l.1 4035893 4078127 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8355   50   I: 4035893-4035942 Caenorhabditis elegans
Exon8367   274   I: 4036629-4036902 Caenorhabditis elegans
Exon8376   137   I: 4036947-4037083 Caenorhabditis elegans
Exon8385   171   I: 4038490-4038660 Caenorhabditis elegans
Exon8394   163   I: 4038710-4038872 Caenorhabditis elegans
Exon8405   182   I: 4044800-4044981 Caenorhabditis elegans
Exon8414   79   I: 4045025-4045103 Caenorhabditis elegans
Exon8423   221   I: 4045496-4045716 Caenorhabditis elegans
Exon8432   83   I: 4046020-4046102 Caenorhabditis elegans
Exon8446   138   I: 4047250-4047387 Caenorhabditis elegans
Exon8459   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8473   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8487   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8501   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8515   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8529   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8543   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8557   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8576   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8591   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8605   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8620   1861   I: 4060266-4062126 Caenorhabditis elegans
Exon8633   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8647   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8658   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8672   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8686   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8704   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8718   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8732   1085   I: 4075626-4076710 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1l.1 4035893 4078127 1

1 Sequence

Length
19833

1 Sequence Ontology Term

Identifier Name Description
transcript