WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F14F3.1a.1 Sequence Name  F14F3.1a.1
Length (nt)  2598   Chromosome Location  X: 10499890-10519579
Chromosome . Primary Identifier  X Chromosome Location . Start  10499890
Chromosome Location . End  10519579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006870 vab-3 F14F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F3.1a F14F3.1a 1368   X: 10505988-10505994

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1a.1 10499890 10519579 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249164   216   X: 10499890-10500105 Caenorhabditis elegans
Exon249175   93   X: 10505902-10505994 Caenorhabditis elegans
Exon249178   148   X: 10509453-10509600 Caenorhabditis elegans
Exon249180   78   X: 10510977-10511054 Caenorhabditis elegans
Exon249182   127   X: 10511123-10511249 Caenorhabditis elegans
Exon249184   104   X: 10511318-10511421 Caenorhabditis elegans
Exon249186   116   X: 10512298-10512413 Caenorhabditis elegans
Exon249191   123   X: 10516371-10516493 Caenorhabditis elegans
Exon249195   83   X: 10516560-10516642 Caenorhabditis elegans
Exon249199   278   X: 10517424-10517701 Caenorhabditis elegans
Exon249203   170   X: 10517840-10518009 Caenorhabditis elegans
Exon249208   1062   X: 10518518-10519579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F3.1a.1 10499890 10519579 1

1 Sequence

Length
2598

1 Sequence Ontology Term

Identifier Name Description
transcript