WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F14F3.1a Sequence Name  F14F3.1a
Length (nt)  1368   Chromosome Location  X: 10505988-10505994
Chromosome . Primary Identifier  X Chromosome Location . Start  10505988
Chromosome Location . End  10505994
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24899 VAB-3, isoform a 51.0 455 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00044615
WBRNAi00114721
WBRNAi00013290
WBRNAi00027638
WBRNAi00101789
WBRNAi00063282
WBRNAi00063284
WBRNAi00075644
WBRNAi00115868
WBRNAi00107544
WBRNAi00065712
WBRNAi00075643
WBRNAi00063285
WBRNAi00063287
WBRNAi00085278
WBRNAi00075647
WBRNAi00107181
WBRNAi00107162
WBRNAi00107395
WBRNAi00117502
WBRNAi00117507

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F14F3.1a 10505988 10505994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006870 vab-3 F14F3.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F14F3.1a 10505988 10505994 1
CDS:F14F3.1a 10509453 10509600 1
CDS:F14F3.1a 10510977 10511054 1
CDS:F14F3.1a 10511123 10511249 1
CDS:F14F3.1a 10511318 10511421 1
CDS:F14F3.1a 10512298 10512413 1
CDS:F14F3.1a 10516371 10516493 1
CDS:F14F3.1a 10516560 10516642 1
CDS:F14F3.1a 10517424 10517701 1
CDS:F14F3.1a 10517840 10518009 1
CDS:F14F3.1a 10518518 10518651 1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F14F3.1a.1 F14F3.1a.1 2598   X: 10499890-10519579
Transcript:F14F3.1a.2 F14F3.1a.2 2389   X: 10505896-10519580