WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D3.5.1 Sequence Name  C33D3.5.1
Length (nt)  1512   Chromosome Location  X: 10491344-10497139
Chromosome . Primary Identifier  X Chromosome Location . Start  10491344
Chromosome Location . End  10497139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007896 C33D3.5 C33D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D3.5 C33D3.5 1512   X: 10491344-10491528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D3.5.1 10491344 10497139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249216   185   X: 10491344-10491528 Caenorhabditis elegans
Exon249218   81   X: 10493667-10493747 Caenorhabditis elegans
Exon249219   204   X: 10493873-10494076 Caenorhabditis elegans
Exon249220   126   X: 10494933-10495058 Caenorhabditis elegans
Exon249221   78   X: 10495318-10495395 Caenorhabditis elegans
Exon249222   114   X: 10495599-10495712 Caenorhabditis elegans
Exon249223   661   X: 10496331-10496991 Caenorhabditis elegans
Exon249224   63   X: 10497077-10497139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D3.5.1 10491344 10497139 1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
transcript