WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1h.1 Sequence Name  C09D1.1h.1
Length (nt)  21108   Chromosome Location  I: 4047136-4090427
Chromosome . Primary Identifier  I Chromosome Location . Start  4047136
Chromosome Location . End  4090427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1h C09D1.1h 21108   I: 4047136-4047214

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1h.1 4047136 4090427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

39 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8437   79   I: 4047136-4047214 Caenorhabditis elegans
Exon8455   111   I: 4047965-4048075 Caenorhabditis elegans
Exon8469   227   I: 4048124-4048350 Caenorhabditis elegans
Exon8483   744   I: 4048906-4049649 Caenorhabditis elegans
Exon8497   69   I: 4049972-4050040 Caenorhabditis elegans
Exon8511   216   I: 4050093-4050308 Caenorhabditis elegans
Exon8525   188   I: 4051955-4052142 Caenorhabditis elegans
Exon8539   484   I: 4052456-4052939 Caenorhabditis elegans
Exon8553   186   I: 4053398-4053583 Caenorhabditis elegans
Exon8565   66   I: 4054476-4054541 Caenorhabditis elegans
Exon8573   1854   I: 4055391-4057244 Caenorhabditis elegans
Exon8587   357   I: 4058536-4058892 Caenorhabditis elegans
Exon8601   1232   I: 4058979-4060210 Caenorhabditis elegans
Exon8610   142   I: 4060266-4060407 Caenorhabditis elegans
Exon8629   157   I: 4062304-4062460 Caenorhabditis elegans
Exon8643   2160   I: 4062675-4064834 Caenorhabditis elegans
Exon8654   6065   I: 4064920-4070984 Caenorhabditis elegans
Exon8668   244   I: 4071035-4071278 Caenorhabditis elegans
Exon8682   330   I: 4071333-4071662 Caenorhabditis elegans
Exon8700   104   I: 4073538-4073641 Caenorhabditis elegans
Exon8714   275   I: 4075253-4075527 Caenorhabditis elegans
Exon8728   1085   I: 4075626-4076710 Caenorhabditis elegans
Exon8742   113   I: 4077177-4077289 Caenorhabditis elegans
Exon8756   169   I: 4077395-4077563 Caenorhabditis elegans
Exon8768   100   I: 4078024-4078123 Caenorhabditis elegans
Exon8783   192   I: 4079525-4079716 Caenorhabditis elegans
Exon8797   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8809   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8821   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8833   122   I: 4083824-4083945 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1h.1 4047136 4090427 1

1 Sequence

Length
21108

1 Sequence Ontology Term

Identifier Name Description
transcript