WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F5.2a.1 Sequence Name  F59F5.2a.1
Length (nt)  1927   Chromosome Location  X: 10533699-10537131
Chromosome . Primary Identifier  X Chromosome Location . Start  10533699
Chromosome Location . End  10537131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010341 glo-3 F59F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F5.2a F59F5.2a 1824   X: 10533785-10533853

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.2a.1 10533699 10537131 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249313   155   X: 10533699-10533853 Caenorhabditis elegans
Exon249315   97   X: 10533902-10533998 Caenorhabditis elegans
Exon249317   208   X: 10534044-10534251 Caenorhabditis elegans
Exon249319   161   X: 10534296-10534456 Caenorhabditis elegans
Exon249321   109   X: 10534665-10534773 Caenorhabditis elegans
Exon249322   148   X: 10534821-10534968 Caenorhabditis elegans
Exon249324   179   X: 10535017-10535195 Caenorhabditis elegans
Exon249326   127   X: 10535244-10535370 Caenorhabditis elegans
Exon249328   171   X: 10536187-10536357 Caenorhabditis elegans
Exon249330   184   X: 10536403-10536586 Caenorhabditis elegans
Exon249332   120   X: 10536636-10536755 Caenorhabditis elegans
Exon249334   104   X: 10536813-10536916 Caenorhabditis elegans
Exon249337   164   X: 10536968-10537131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59F5.2a.1 10533699 10537131 1

1 Sequence

Length
1927

1 Sequence Ontology Term

Identifier Name Description
transcript