WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59F5.3.1 Sequence Name  F59F5.3.1
Length (nt)  2194   Chromosome Location  X: 10537106-10542413
Chromosome . Primary Identifier  X Chromosome Location . Start  10537106
Chromosome Location . End  10542413 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59F5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010342 F59F5.3 F59F5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59F5.3 F59F5.3 2046   X: 10537227-10537331

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F59F5.3.1 10537106 10542413 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249338   226   X: 10537106-10537331 Caenorhabditis elegans
Exon249339   106   X: 10537377-10537482 Caenorhabditis elegans
Exon249340   113   X: 10537528-10537640 Caenorhabditis elegans
Exon249341   213   X: 10537685-10537897 Caenorhabditis elegans
Exon249342   96   X: 10539364-10539459 Caenorhabditis elegans
Exon249343   127   X: 10539504-10539630 Caenorhabditis elegans
Exon249344   106   X: 10539679-10539784 Caenorhabditis elegans
Exon249345   82   X: 10539832-10539913 Caenorhabditis elegans
Exon249346   46   X: 10539955-10540000 Caenorhabditis elegans
Exon249347   98   X: 10540047-10540144 Caenorhabditis elegans
Exon249348   150   X: 10541163-10541312 Caenorhabditis elegans
Exon249349   111   X: 10541354-10541464 Caenorhabditis elegans
Exon249350   136   X: 10541508-10541643 Caenorhabditis elegans
Exon249351   145   X: 10541690-10541834 Caenorhabditis elegans
Exon249352   150   X: 10541882-10542031 Caenorhabditis elegans
Exon249353   82   X: 10542081-10542162 Caenorhabditis elegans
Exon249354   207   X: 10542207-10542413 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F59F5.3.1 10537106 10542413 -1

1 Sequence

Length
2194

1 Sequence Ontology Term

Identifier Name Description
transcript