WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57C7.2a Sequence Name  F57C7.2a
Length (nt)  1893   Chromosome Location  X: 10577129-10577227
Chromosome . Primary Identifier  X Chromosome Location . Start  10577129
Chromosome Location . End  10577227
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31014 NHX-5, isoform a 70.4 630 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048860
WBRNAi00015890
WBRNAi00033031
WBRNAi00086174
WBRNAi00086172

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F57C7.2a 10577129 10577227 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003733 nhx-5 F57C7.2 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F57C7.2a 10577129 10577227 1
CDS:F57C7.2a 10577289 10577430 1
CDS:F57C7.2a 10577475 10577589 1
CDS:F57C7.2a 10577751 10577859 1
CDS:F57C7.2a 10577906 10578060 1
CDS:F57C7.2a 10578129 10578223 1
CDS:F57C7.2a 10578276 10578381 1
CDS:F57C7.2a 10578430 10578518 1
CDS:F57C7.2a 10578559 10578708 1
CDS:F57C7.2a 10578964 10579061 1
CDS:F57C7.2a 10579109 10579213 1
CDS:F57C7.2a 10579257 10579342 1
CDS:F57C7.2a 10579463 10579550 1
CDS:F57C7.2a 10579598 10579689 1
CDS:F57C7.2a 10579734 10579904 1
CDS:F57C7.2a 10580132 10580237 1
CDS:F57C7.2a 10580600 10580639 1
CDS:F57C7.2a 10580690 10580736 1

1 Sequence

Length
1893

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57C7.2a.1 F57C7.2a.1 2360   X: 10576960-10581034