WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D1.1d.1 Sequence Name  C09D1.1d.1
Length (nt)  4784   Chromosome Location  I: 4080539-4090885
Chromosome . Primary Identifier  I Chromosome Location . Start  4080539
Chromosome Location . End  4090885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D1.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006820 unc-89 C09D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D1.1d C09D1.1d 4191   I: 4080674-4080705

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1d.1 4080539 4090885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon8790   167   I: 4080539-4080705 Caenorhabditis elegans
Exon8794   357   I: 4081936-4082292 Caenorhabditis elegans
Exon8806   265   I: 4082402-4082666 Caenorhabditis elegans
Exon8818   287   I: 4083014-4083300 Caenorhabditis elegans
Exon8830   122   I: 4083824-4083945 Caenorhabditis elegans
Exon8842   404   I: 4084065-4084468 Caenorhabditis elegans
Exon8854   201   I: 4085025-4085225 Caenorhabditis elegans
Exon8866   528   I: 4086656-4087183 Caenorhabditis elegans
Exon8878   322   I: 4087457-4087778 Caenorhabditis elegans
Exon8890   785   I: 4088154-4088938 Caenorhabditis elegans
Exon8902   329   I: 4089295-4089623 Caenorhabditis elegans
Exon8914   219   I: 4089682-4089900 Caenorhabditis elegans
Exon8926   240   I: 4089947-4090186 Caenorhabditis elegans
Exon8947   558   I: 4090328-4090885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D1.1d.1 4080539 4090885 1

1 Sequence

Length
4784

1 Sequence Ontology Term

Identifier Name Description
transcript