WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M79.1b.1 Sequence Name  M79.1b.1
Length (nt)  4078   Chromosome Location  X: 10605827-10624207
Chromosome . Primary Identifier  X Chromosome Location . Start  10605827
Chromosome Location . End  10624207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.1b M79.1b 3645   X: 10606199-10606337

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1b.1 10605827 10624207 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249600   511   X: 10605827-10606337 Caenorhabditis elegans
Exon249609   84   X: 10606584-10606667 Caenorhabditis elegans
Exon249617   104   X: 10606722-10606825 Caenorhabditis elegans
Exon249626   158   X: 10607258-10607415 Caenorhabditis elegans
Exon249633   502   X: 10608431-10608932 Caenorhabditis elegans
Exon249640   251   X: 10609011-10609261 Caenorhabditis elegans
Exon249647   228   X: 10609310-10609537 Caenorhabditis elegans
Exon249654   578   X: 10609821-10610398 Caenorhabditis elegans
Exon249661   441   X: 10610458-10610898 Caenorhabditis elegans
Exon249668   96   X: 10610950-10611045 Caenorhabditis elegans
Exon249675   344   X: 10611622-10611965 Caenorhabditis elegans
Exon249682   327   X: 10612074-10612400 Caenorhabditis elegans
Exon249691   160   X: 10612599-10612758 Caenorhabditis elegans
Exon249700   74   X: 10616941-10617014 Caenorhabditis elegans
Exon249706   101   X: 10617782-10617882 Caenorhabditis elegans
Exon249713   56   X: 10623979-10624034 Caenorhabditis elegans
Exon249719   63   X: 10624145-10624207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1b.1 10605827 10624207 -1

1 Sequence

Length
4078

1 Sequence Ontology Term

Identifier Name Description
transcript