WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M79.1a.1 Sequence Name  M79.1a.1
Length (nt)  4085   Chromosome Location  X: 10605832-10624189
Chromosome . Primary Identifier  X Chromosome Location . Start  10605832
Chromosome Location . End  10624189 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.1a M79.1a 3675   X: 10606199-10606337

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1a.1 10605832 10624189 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249601   506   X: 10605832-10606337 Caenorhabditis elegans
Exon249608   84   X: 10606584-10606667 Caenorhabditis elegans
Exon249616   104   X: 10606722-10606825 Caenorhabditis elegans
Exon249625   158   X: 10607258-10607415 Caenorhabditis elegans
Exon249632   502   X: 10608431-10608932 Caenorhabditis elegans
Exon249639   251   X: 10609011-10609261 Caenorhabditis elegans
Exon249646   228   X: 10609310-10609537 Caenorhabditis elegans
Exon249653   578   X: 10609821-10610398 Caenorhabditis elegans
Exon249660   441   X: 10610458-10610898 Caenorhabditis elegans
Exon249667   96   X: 10610950-10611045 Caenorhabditis elegans
Exon249674   344   X: 10611622-10611965 Caenorhabditis elegans
Exon249681   327   X: 10612074-10612400 Caenorhabditis elegans
Exon249690   160   X: 10612599-10612758 Caenorhabditis elegans
Exon249699   74   X: 10616941-10617014 Caenorhabditis elegans
Exon249703   30   X: 10617185-10617214 Caenorhabditis elegans
Exon249705   101   X: 10617782-10617882 Caenorhabditis elegans
Exon249712   56   X: 10623979-10624034 Caenorhabditis elegans
Exon249717   45   X: 10624145-10624189 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1a.1 10605832 10624189 -1

1 Sequence

Length
4085

1 Sequence Ontology Term

Identifier Name Description
transcript