WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M79.1e.1 Sequence Name  M79.1e.1
Length (nt)  3998   Chromosome Location  X: 10605834-10624146
Chromosome . Primary Identifier  X Chromosome Location . Start  10605834
Chromosome Location . End  10624146 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.1e M79.1e 3633   X: 10606199-10606337

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1e.1 10605834 10624146 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249602   504   X: 10605834-10606337 Caenorhabditis elegans
Exon249612   84   X: 10606584-10606667 Caenorhabditis elegans
Exon249620   104   X: 10606722-10606825 Caenorhabditis elegans
Exon249629   158   X: 10607258-10607415 Caenorhabditis elegans
Exon249637   490   X: 10608443-10608932 Caenorhabditis elegans
Exon249643   251   X: 10609011-10609261 Caenorhabditis elegans
Exon249650   228   X: 10609310-10609537 Caenorhabditis elegans
Exon249657   578   X: 10609821-10610398 Caenorhabditis elegans
Exon249664   441   X: 10610458-10610898 Caenorhabditis elegans
Exon249671   96   X: 10610950-10611045 Caenorhabditis elegans
Exon249678   344   X: 10611622-10611965 Caenorhabditis elegans
Exon249685   327   X: 10612074-10612400 Caenorhabditis elegans
Exon249694   160   X: 10612599-10612758 Caenorhabditis elegans
Exon249702   74   X: 10616941-10617014 Caenorhabditis elegans
Exon249708   101   X: 10617782-10617882 Caenorhabditis elegans
Exon249715   56   X: 10623979-10624034 Caenorhabditis elegans
Exon249716   2   X: 10624145-10624146 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M79.1e.1 10605834 10624146 -1

1 Sequence

Length
3998

1 Sequence Ontology Term

Identifier Name Description
transcript