WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M79.1c.1 Sequence Name  M79.1c.1
Length (nt)  4128   Chromosome Location  X: 10605854-10614143
Chromosome . Primary Identifier  X Chromosome Location . Start  10605854
Chromosome Location . End  10614143 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.1c M79.1c 3630   X: 10606199-10606337

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M79.1c.1 10605854 10614143 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249604   484   X: 10605854-10606337 Caenorhabditis elegans
Exon249610   84   X: 10606584-10606667 Caenorhabditis elegans
Exon249618   104   X: 10606722-10606825 Caenorhabditis elegans
Exon249627   158   X: 10607258-10607415 Caenorhabditis elegans
Exon249634   502   X: 10608431-10608932 Caenorhabditis elegans
Exon249641   251   X: 10609011-10609261 Caenorhabditis elegans
Exon249648   228   X: 10609310-10609537 Caenorhabditis elegans
Exon249655   578   X: 10609821-10610398 Caenorhabditis elegans
Exon249662   441   X: 10610458-10610898 Caenorhabditis elegans
Exon249669   96   X: 10610950-10611045 Caenorhabditis elegans
Exon249676   344   X: 10611622-10611965 Caenorhabditis elegans
Exon249683   327   X: 10612074-10612400 Caenorhabditis elegans
Exon249692   160   X: 10612599-10612758 Caenorhabditis elegans
Exon249696   371   X: 10613773-10614143 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M79.1c.1 10605854 10614143 -1

1 Sequence

Length
4128

1 Sequence Ontology Term

Identifier Name Description
transcript