WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M79.1g.1 Sequence Name  M79.1g.1
Length (nt)  3375   Chromosome Location  X: 10606199-10612733
Chromosome . Primary Identifier  X Chromosome Location . Start  10606199
Chromosome Location . End  10612733 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M79.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M79.1g M79.1g 3375   X: 10606199-10606337

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M79.1g.1 10606199 10612733 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249607   139   X: 10606199-10606337 Caenorhabditis elegans
Exon249614   84   X: 10606584-10606667 Caenorhabditis elegans
Exon249622   104   X: 10606722-10606825 Caenorhabditis elegans
Exon249631   158   X: 10607258-10607415 Caenorhabditis elegans
Exon249638   490   X: 10608443-10608932 Caenorhabditis elegans
Exon249645   251   X: 10609011-10609261 Caenorhabditis elegans
Exon249652   228   X: 10609310-10609537 Caenorhabditis elegans
Exon249659   578   X: 10609821-10610398 Caenorhabditis elegans
Exon249666   441   X: 10610458-10610898 Caenorhabditis elegans
Exon249673   96   X: 10610950-10611045 Caenorhabditis elegans
Exon249680   344   X: 10611622-10611965 Caenorhabditis elegans
Exon249687   327   X: 10612074-10612400 Caenorhabditis elegans
Exon249689   135   X: 10612599-10612733 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M79.1g.1 10606199 10612733 -1

1 Sequence

Length
3375

1 Sequence Ontology Term

Identifier Name Description
transcript