WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13E6.4.1 Sequence Name  F13E6.4.1
Length (nt)  2054   Chromosome Location  X: 10691943-10695100
Chromosome . Primary Identifier  X Chromosome Location . Start  10691943
Chromosome Location . End  10695100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13E6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008748 yap-1 F13E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13E6.4 F13E6.4 1329   X: 10691948-10692100

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.4.1 10691943 10695100 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249932   158   X: 10691943-10692100 Caenorhabditis elegans
Exon249933   69   X: 10692409-10692477 Caenorhabditis elegans
Exon249934   122   X: 10692523-10692644 Caenorhabditis elegans
Exon249935   61   X: 10692690-10692750 Caenorhabditis elegans
Exon249936   101   X: 10692798-10692898 Caenorhabditis elegans
Exon249937   206   X: 10692944-10693149 Caenorhabditis elegans
Exon249938   296   X: 10693406-10693701 Caenorhabditis elegans
Exon249939   108   X: 10693755-10693862 Caenorhabditis elegans
Exon249940   123   X: 10694123-10694245 Caenorhabditis elegans
Exon249941   810   X: 10694291-10695100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.4.1 10691943 10695100 1

1 Sequence

Length
2054

1 Sequence Ontology Term

Identifier Name Description
transcript