WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197658 Gene Name  T01C1.9
Sequence Name  ? T01C1.9 Organism  Caenorhabditis elegans
Automated Description  Is affected by elli-1 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 85
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197658

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01C1.9 T01C1.9 85   X: 10731978-10732062
 

Other

0 CDSs

0 RNAi Result

3 Allele

Public Name
gk964260
gk962707
gk509966

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197658 10731978 10732062 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_10732063..10734325   2263 X: 10732063-10734325 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in elli-1(sam-3) comparing to in N2 animals, accordingto tiling array analysis. Fold change > 1.2, q-value < 0.05. WBPaper00050743:elli-1(sam-3)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197658 10731978 10732062 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
85

1 Sequence Ontology Term