WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07A4.1.1 Sequence Name  R07A4.1.1
Length (nt)  1846   Chromosome Location  X: 10734326-10744355
Chromosome . Primary Identifier  X Chromosome Location . Start  10734326
Chromosome Location . End  10744355 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001202 egl-36 R07A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07A4.1 R07A4.1 1677   X: 10734326-10734419

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.1.1 10734326 10744355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250002   94   X: 10734326-10734419 Caenorhabditis elegans
Exon250003   100   X: 10741452-10741551 Caenorhabditis elegans
Exon250004   79   X: 10741660-10741738 Caenorhabditis elegans
Exon250005   140   X: 10741788-10741927 Caenorhabditis elegans
Exon250006   118   X: 10741976-10742093 Caenorhabditis elegans
Exon250007   194   X: 10742301-10742494 Caenorhabditis elegans
Exon250008   592   X: 10742542-10743133 Caenorhabditis elegans
Exon250009   93   X: 10743242-10743334 Caenorhabditis elegans
Exon250010   109   X: 10743383-10743491 Caenorhabditis elegans
Exon250011   63   X: 10743540-10743602 Caenorhabditis elegans
Exon250012   264   X: 10744092-10744355 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.1.1 10734326 10744355 1

1 Sequence

Length
1846

1 Sequence Ontology Term

Identifier Name Description
transcript