WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A10.1b Sequence Name  T05A10.1b
Length (nt)  2178   Chromosome Location  X: 10769294-10769401
Chromosome . Primary Identifier  X Chromosome Location . Start  10769294
Chromosome Location . End  10769401
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36396 SMA-9, isoform b 81.4 725 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00081748
WBRNAi00062962
WBRNAi00062963
WBRNAi00107523
WBRNAi00082715
WBRNAi00107154
WBRNAi00107105
WBRNAi00107610
WBRNAi00107512

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A10.1b 10769294 10769401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004862 sma-9 T05A10.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A10.1b 10769294 10769401 1
CDS:T05A10.1b 10773130 10773654 1
CDS:T05A10.1b 10773707 10773862 1
CDS:T05A10.1b 10773931 10774468 1
CDS:T05A10.1b 10775217 10775344 1
CDS:T05A10.1b 10775530 10775605 1
CDS:T05A10.1b 10775830 10776239 1
CDS:T05A10.1b 10776288 10776524 1

1 Sequence

Length
2178

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A10.1b.1 T05A10.1b.1 2184   X: 10769288-10776524