WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.6e.2 Sequence Name  C43E11.6e.2
Length (nt)  2348   Chromosome Location  I: 4231140-4236028
Chromosome . Primary Identifier  I Chromosome Location . Start  4231140
Chromosome Location . End  4236028 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.6e C43E11.6e 1584   I: 4232617-4232703

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6e.2 4231140 4236028 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9336   86   I: 4231140-4231225 Caenorhabditis elegans
Exon9347   189   I: 4231574-4231762 Caenorhabditis elegans
Exon9355   208   I: 4232496-4232703 Caenorhabditis elegans
Exon9364   163   I: 4233072-4233234 Caenorhabditis elegans
Exon9374   207   I: 4233481-4233687 Caenorhabditis elegans
Exon9384   638   I: 4233886-4234523 Caenorhabditis elegans
Exon9394   348   I: 4234713-4235060 Caenorhabditis elegans
Exon9397   509   I: 4235520-4236028 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6e.2 4231140 4236028 1

1 Sequence

Length
2348

1 Sequence Ontology Term

Identifier Name Description
transcript