WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C43E11.6e Sequence Name  C43E11.6e
Length (nt)  1584   Chromosome Location  I: 4232617-4232703
Chromosome . Primary Identifier  I Chromosome Location . Start  4232617
Chromosome Location . End  4232703
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37753 NAB-1, isoform e 60.2 527 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00042385
WBRNAi00003144
WBRNAi00029761
WBRNAi00077331
WBRNAi00116849
WBRNAi00060404
WBRNAi00060405
WBRNAi00060406
WBRNAi00060407
WBRNAi00117197

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C43E11.6e 4232617 4232703 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C43E11.6e 4232617 4232703 1
CDS:C43E11.6e 4233072 4233234 1
CDS:C43E11.6e 4233481 4233687 1
CDS:C43E11.6e 4233886 4234523 1
CDS:C43E11.6e 4234713 4235060 1
CDS:C43E11.6e 4235520 4235660 1

1 Sequence

Length
1584

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C43E11.6e.2 C43E11.6e.2 2348   I: 4231140-4236028
Transcript:C43E11.6e.1 C43E11.6e.1 2173   I: 4231143-4236045
Transcript:C43E11.6e.3 C43E11.6e.3 2096   I: 4232490-4236045