WormMine: Gene WBGene00200252

• WormBase Gene ID: WBGene00200252
• Gene Name: F31B12.6
• Sequence Name: F31B12.6
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by cep-1 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 158

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00200252

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F31B12.6	F31B12.6	158	X: 10821297-10821454

Other

0 CDSs

0 RNAi Result

7 Allele

• gk964260
• gk962707
• gk844037
• gk688259
• gk469104
• WBVar01801037
• gk292773

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: WBGene00200252
• Start: 10821297
• End: 10821454
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal
	Small RNAs (less than 200 bases long) that showed significantly increased expression in rpc-1(RNAi) animals.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00067416:rpc-1(RNAi)_upregulated_smallRNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00200252
• Start: 10821297
• End: 10821454
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 158

1 Sequence Ontology Term