WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B10.5.1 Sequence Name  F47B10.5.1
Length (nt)  563   Chromosome Location  X: 10889041-10890556
Chromosome . Primary Identifier  X Chromosome Location . Start  10889041
Chromosome Location . End  10890556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009816 F47B10.5 F47B10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B10.5 F47B10.5 363   X: 10889157-10889240

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.5.1 10889041 10890556 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251234   200   X: 10889041-10889240 Caenorhabditis elegans
Exon251235   124   X: 10889287-10889410 Caenorhabditis elegans
Exon251236   100   X: 10889466-10889565 Caenorhabditis elegans
Exon251237   139   X: 10890418-10890556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.5.1 10889041 10890556 -1

1 Sequence

Length
563

1 Sequence Ontology Term

Identifier Name Description
transcript