WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47B10.2.1 Sequence Name  F47B10.2.1
Length (nt)  2429   Chromosome Location  X: 10893567-10896598
Chromosome . Primary Identifier  X Chromosome Location . Start  10893567
Chromosome Location . End  10896598 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47B10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009813 haly-1 F47B10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47B10.2 F47B10.2 2034   X: 10893689-10893911

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.2.1 10893567 10896598 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251246   345   X: 10893567-10893911 Caenorhabditis elegans
Exon251247   179   X: 10893958-10894136 Caenorhabditis elegans
Exon251248   65   X: 10894183-10894247 Caenorhabditis elegans
Exon251249   372   X: 10894312-10894683 Caenorhabditis elegans
Exon251250   192   X: 10894737-10894928 Caenorhabditis elegans
Exon251251   240   X: 10894974-10895213 Caenorhabditis elegans
Exon251252   231   X: 10895258-10895488 Caenorhabditis elegans
Exon251253   200   X: 10895534-10895733 Caenorhabditis elegans
Exon251254   103   X: 10895779-10895881 Caenorhabditis elegans
Exon251255   157   X: 10895935-10896091 Caenorhabditis elegans
Exon251256   345   X: 10896254-10896598 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47B10.2.1 10893567 10896598 -1

1 Sequence

Length
2429

1 Sequence Ontology Term

Identifier Name Description
transcript