WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C8.3.1 Sequence Name  K09C8.3.1
Length (nt)  1768   Chromosome Location  X: 10960914-10963503
Chromosome . Primary Identifier  X Chromosome Location . Start  10960914
Chromosome Location . End  10963503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003529 nas-10 K09C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C8.3 K09C8.3 1623   X: 10960982-10961097

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.3.1 10960914 10963503 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251346   184   X: 10960914-10961097 Caenorhabditis elegans
Exon251347   259   X: 10961143-10961401 Caenorhabditis elegans
Exon251348   157   X: 10961628-10961784 Caenorhabditis elegans
Exon251349   350   X: 10961832-10962181 Caenorhabditis elegans
Exon251350   195   X: 10962228-10962422 Caenorhabditis elegans
Exon251351   112   X: 10962619-10962730 Caenorhabditis elegans
Exon251352   87   X: 10962779-10962865 Caenorhabditis elegans
Exon251353   212   X: 10962985-10963196 Caenorhabditis elegans
Exon251354   38   X: 10963248-10963285 Caenorhabditis elegans
Exon251355   174   X: 10963330-10963503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C8.3.1 10960914 10963503 -1

1 Sequence

Length
1768

1 Sequence Ontology Term

Identifier Name Description
transcript