WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K09C8.5 Sequence Name  K09C8.5
Length (nt)  3987   Chromosome Location  X: 10972272-10972322
Chromosome . Primary Identifier  X Chromosome Location . Start  10972272
Chromosome Location . End  10972322
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18882 PXN-2 151.1 1328 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00110194
WBRNAi00114281
WBRNAi00114046
WBRNAi00114125
WBRNAi00114204
WBRNAi00050404
WBRNAi00016895
WBRNAi00034199
WBRNAi00110193
WBRNAi00114086
WBRNAi00114165
WBRNAi00114243
WBRNAi00060866
WBRNAi00060867
WBRNAi00060868
WBRNAi00060869
WBRNAi00060871
WBRNAi00060872
WBRNAi00060870
WBRNAi00060873
WBRNAi00060874

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K09C8.5 10972272 10972322 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004257 pxn-2 K09C8.5 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:K09C8.5 10972272 10972322 -1
CDS:K09C8.5 10972536 10972814 -1
CDS:K09C8.5 10972894 10973123 -1
CDS:K09C8.5 10973226 10973403 -1
CDS:K09C8.5 10974671 10974817 -1
CDS:K09C8.5 10974865 10975118 -1
CDS:K09C8.5 10975327 10975432 -1
CDS:K09C8.5 10975480 10975597 -1
CDS:K09C8.5 10975660 10976023 -1
CDS:K09C8.5 10976203 10976607 -1
CDS:K09C8.5 10976655 10976821 -1
CDS:K09C8.5 10976875 10977083 -1
CDS:K09C8.5 10977128 10977281 -1
CDS:K09C8.5 10977381 10977535 -1
CDS:K09C8.5 10977585 10977969 -1
CDS:K09C8.5 10978014 10978138 -1
CDS:K09C8.5 10978191 10978305 -1
CDS:K09C8.5 10978349 10978494 -1
CDS:K09C8.5 10978771 10978914 -1
CDS:K09C8.5 10978965 10979119 -1
CDS:K09C8.5 10979166 10979265 -1

1 Sequence

Length
3987

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K09C8.5.1 K09C8.5.1 4116   X: 10972164-10979286