WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2f.1 Sequence Name  F58A3.2f.1
Length (nt)  3850   Chromosome Location  X: 11016401-11023421
Chromosome . Primary Identifier  X Chromosome Location . Start  11016401
Chromosome Location . End  11023421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2f F58A3.2f 3276   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2f.1 11016401 11023421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251524   128   X: 11016401-11016528 Caenorhabditis elegans
Exon251542   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251555   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251568   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251580   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251594   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251607   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251620   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251633   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251646   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251659   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251672   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251685   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251698   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251711   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251724   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251737   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251743   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251758   165   X: 11021904-11022068 Caenorhabditis elegans
Exon251764   76   X: 11022130-11022205 Caenorhabditis elegans
Exon251771   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251779   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251789   315   X: 11023107-11023421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2f.1 11016401 11023421 1

1 Sequence

Length
3850

1 Sequence Ontology Term

Identifier Name Description
transcript