WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2p.1 Sequence Name  F58A3.2p.1
Length (nt)  3594   Chromosome Location  X: 11016408-11023404
Chromosome . Primary Identifier  X Chromosome Location . Start  11016408
Chromosome Location . End  11023404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2p F58A3.2p 3306   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2p.1 11016408 11023404 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251525   121   X: 11016408-11016528 Caenorhabditis elegans
Exon251547   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251560   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251573   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251586   195   X: 11017945-11018139 Caenorhabditis elegans
Exon251599   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251612   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251625   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251638   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251651   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251664   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251677   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251690   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251703   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251716   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251729   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251742   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251748   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251761   165   X: 11021904-11022068 Caenorhabditis elegans
Exon251774   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251782   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251787   298   X: 11023107-11023404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2p.1 11016408 11023404 1

1 Sequence

Length
3594

1 Sequence Ontology Term

Identifier Name Description
transcript