WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.6 Sequence Name  F58A3.2a.6
Length (nt)  3380   Chromosome Location  X: 11016410-11023046
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023046 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.6

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.6 11016410 11023046 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251526   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251540   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251553   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251566   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251579   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251592   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251605   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251618   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251631   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251644   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251657   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251670   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251683   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251696   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251709   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251722   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251735   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251751   221   X: 11021723-11021943 Caenorhabditis elegans
Exon251770   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251783   94   X: 11022953-11023046 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.6 11016410 11023046 1

1 Sequence

Length
3380

1 Sequence Ontology Term

Identifier Name Description
transcript