WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.4 Sequence Name  F58A3.2a.4
Length (nt)  3958   Chromosome Location  X: 11016410-11023310
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023310 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2a.4 11016410 11023310 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251528   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251538   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251551   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251564   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251577   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251590   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251603   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251616   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251629   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251642   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251655   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251668   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251681   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251694   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251707   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251720   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251733   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251753   346   X: 11021723-11022068 Caenorhabditis elegans
Exon251765   332   X: 11022130-11022461 Caenorhabditis elegans
Exon251777   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251785   204   X: 11023107-11023310 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2a.4 11016410 11023310 1

1 Sequence

Length
3958

1 Sequence Ontology Term

Identifier Name Description
transcript