WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.3 Sequence Name  F58A3.2a.3
Length (nt)  3659   Chromosome Location  X: 11016410-11023386
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023386 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251529   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251537   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251550   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251563   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251576   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251589   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251602   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251615   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251628   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251641   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251654   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251667   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251680   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251693   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251706   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251719   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251732   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251750   221   X: 11021723-11021943 Caenorhabditis elegans
Exon251768   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251776   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251786   280   X: 11023107-11023386 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

1 Sequence

Length
3659

1 Sequence Ontology Term

Identifier Name Description
transcript