WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.1 Sequence Name  F58A3.2a.1
Length (nt)  3895   Chromosome Location  X: 11016410-11023421
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.1 11016410 11023421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251531   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251535   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251548   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251561   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251574   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251587   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251600   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251613   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251626   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251639   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251652   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251665   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251678   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251691   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251704   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251717   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251730   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251752   346   X: 11021723-11022068 Caenorhabditis elegans
Exon251763   76   X: 11022130-11022205 Caenorhabditis elegans
Exon251767   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251775   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251788   315   X: 11023107-11023421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.1 11016410 11023421 1

1 Sequence

Length
3895

1 Sequence Ontology Term

Identifier Name Description
transcript