WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10H11.9.1 Sequence Name  C10H11.9.1
Length (nt)  4366   Chromosome Location  I: 4738171-4744321
Chromosome . Primary Identifier  I Chromosome Location . Start  4738171
Chromosome Location . End  4744321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10H11.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002694 let-502 C10H11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10H11.9 C10H11.9 3522   I: 4738955-4739136

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10H11.9.1 4738171 4744321 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10686   966   I: 4738171-4739136 Caenorhabditis elegans
Exon10687   259   I: 4739515-4739773 Caenorhabditis elegans
Exon10688   171   I: 4739826-4739996 Caenorhabditis elegans
Exon10689   237   I: 4740501-4740737 Caenorhabditis elegans
Exon10690   69   I: 4740786-4740854 Caenorhabditis elegans
Exon10691   1171   I: 4740908-4742078 Caenorhabditis elegans
Exon10692   406   I: 4742127-4742532 Caenorhabditis elegans
Exon10693   715   I: 4742581-4743295 Caenorhabditis elegans
Exon10694   161   I: 4743712-4743872 Caenorhabditis elegans
Exon10695   82   I: 4744061-4744142 Caenorhabditis elegans
Exon10696   129   I: 4744193-4744321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10H11.9.1 4738171 4744321 -1

1 Sequence

Length
4366

1 Sequence Ontology Term

Identifier Name Description
transcript