WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G3.4.1 Sequence Name  W04G3.4.1
Length (nt)  2276   Chromosome Location  X: 11068527-11072047
Chromosome . Primary Identifier  X Chromosome Location . Start  11068527
Chromosome Location . End  11072047 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G3.4 W04G3.4 1767   X: 11068766-11068805

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.4.1 11068527 11072047 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251902   279   X: 11068527-11068805 Caenorhabditis elegans
Exon251903   80   X: 11068856-11068935 Caenorhabditis elegans
Exon251904   84   X: 11069306-11069389 Caenorhabditis elegans
Exon251905   277   X: 11069486-11069762 Caenorhabditis elegans
Exon251906   128   X: 11069818-11069945 Caenorhabditis elegans
Exon251908   153   X: 11070110-11070262 Caenorhabditis elegans
Exon251909   184   X: 11070310-11070493 Caenorhabditis elegans
Exon251910   89   X: 11070698-11070786 Caenorhabditis elegans
Exon251911   54   X: 11070835-11070888 Caenorhabditis elegans
Exon251912   119   X: 11070938-11071056 Caenorhabditis elegans
Exon251913   164   X: 11071100-11071263 Caenorhabditis elegans
Exon251914   170   X: 11071309-11071478 Caenorhabditis elegans
Exon251915   495   X: 11071553-11072047 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.4.1 11068527 11072047 1

1 Sequence

Length
2276

1 Sequence Ontology Term

Identifier Name Description
transcript