WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D2.1a.1 Sequence Name  F13D2.1a.1
Length (nt)  5037   Chromosome Location  X: 11163956-11189564
Chromosome . Primary Identifier  X Chromosome Location . Start  11163956
Chromosome Location . End  11189564 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008735 F13D2.1 F13D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D2.1a F13D2.1a 4914   X: 11164079-11164172

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1a.1 11163956 11189564 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

37 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252108   217   X: 11163956-11164172 Caenorhabditis elegans
Exon252110   121   X: 11164216-11164336 Caenorhabditis elegans
Exon252112   225   X: 11164383-11164607 Caenorhabditis elegans
Exon252114   147   X: 11164914-11165060 Caenorhabditis elegans
Exon252116   181   X: 11165109-11165289 Caenorhabditis elegans
Exon252118   88   X: 11165536-11165623 Caenorhabditis elegans
Exon252120   191   X: 11165668-11165858 Caenorhabditis elegans
Exon252122   69   X: 11165914-11165982 Caenorhabditis elegans
Exon252124   219   X: 11166029-11166247 Caenorhabditis elegans
Exon252126   95   X: 11166798-11166892 Caenorhabditis elegans
Exon252128   148   X: 11167088-11167235 Caenorhabditis elegans
Exon252130   238   X: 11167287-11167524 Caenorhabditis elegans
Exon252132   103   X: 11167570-11167672 Caenorhabditis elegans
Exon252134   177   X: 11167722-11167898 Caenorhabditis elegans
Exon252136   111   X: 11167944-11168054 Caenorhabditis elegans
Exon252138   118   X: 11168331-11168448 Caenorhabditis elegans
Exon252140   58   X: 11168500-11168557 Caenorhabditis elegans
Exon252142   272   X: 11168605-11168876 Caenorhabditis elegans
Exon252144   148   X: 11168927-11169074 Caenorhabditis elegans
Exon252146   90   X: 11169126-11169215 Caenorhabditis elegans
Exon252149   76   X: 11169422-11169497 Caenorhabditis elegans
Exon252150   126   X: 11169585-11169710 Caenorhabditis elegans
Exon252152   112   X: 11169785-11169896 Caenorhabditis elegans
Exon252154   165   X: 11170280-11170444 Caenorhabditis elegans
Exon252156   168   X: 11170673-11170840 Caenorhabditis elegans
Exon252158   177   X: 11174041-11174217 Caenorhabditis elegans
Exon252160   174   X: 11174274-11174447 Caenorhabditis elegans
Exon252162   138   X: 11175076-11175213 Caenorhabditis elegans
Exon252164   72   X: 11175944-11176015 Caenorhabditis elegans
Exon252182   106   X: 11187646-11187751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1a.1 11163956 11189564 -1

1 Sequence

Length
5037

1 Sequence Ontology Term

Identifier Name Description
transcript