WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D2.1b.1 Sequence Name  F13D2.1b.1
Length (nt)  5151   Chromosome Location  X: 11163959-11189615
Chromosome . Primary Identifier  X Chromosome Location . Start  11163959
Chromosome Location . End  11189615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008735 F13D2.1 F13D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D2.1b F13D2.1b 4980   X: 11164079-11164172

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1b.1 11163959 11189615 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

37 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252109   214   X: 11163959-11164172 Caenorhabditis elegans
Exon252111   121   X: 11164216-11164336 Caenorhabditis elegans
Exon252113   225   X: 11164383-11164607 Caenorhabditis elegans
Exon252115   147   X: 11164914-11165060 Caenorhabditis elegans
Exon252117   181   X: 11165109-11165289 Caenorhabditis elegans
Exon252119   88   X: 11165536-11165623 Caenorhabditis elegans
Exon252121   191   X: 11165668-11165858 Caenorhabditis elegans
Exon252123   69   X: 11165914-11165982 Caenorhabditis elegans
Exon252125   219   X: 11166029-11166247 Caenorhabditis elegans
Exon252127   95   X: 11166798-11166892 Caenorhabditis elegans
Exon252129   148   X: 11167088-11167235 Caenorhabditis elegans
Exon252131   238   X: 11167287-11167524 Caenorhabditis elegans
Exon252133   103   X: 11167570-11167672 Caenorhabditis elegans
Exon252135   177   X: 11167722-11167898 Caenorhabditis elegans
Exon252137   111   X: 11167944-11168054 Caenorhabditis elegans
Exon252139   118   X: 11168331-11168448 Caenorhabditis elegans
Exon252141   58   X: 11168500-11168557 Caenorhabditis elegans
Exon252143   272   X: 11168605-11168876 Caenorhabditis elegans
Exon252145   148   X: 11168927-11169074 Caenorhabditis elegans
Exon252147   90   X: 11169126-11169215 Caenorhabditis elegans
Exon252148   142   X: 11169356-11169497 Caenorhabditis elegans
Exon252151   126   X: 11169585-11169710 Caenorhabditis elegans
Exon252153   112   X: 11169785-11169896 Caenorhabditis elegans
Exon252155   165   X: 11170280-11170444 Caenorhabditis elegans
Exon252157   168   X: 11170673-11170840 Caenorhabditis elegans
Exon252159   177   X: 11174041-11174217 Caenorhabditis elegans
Exon252161   174   X: 11174274-11174447 Caenorhabditis elegans
Exon252163   138   X: 11175076-11175213 Caenorhabditis elegans
Exon252165   72   X: 11175944-11176015 Caenorhabditis elegans
Exon252183   106   X: 11187646-11187751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1b.1 11163959 11189615 -1

1 Sequence

Length
5151

1 Sequence Ontology Term

Identifier Name Description
transcript