WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D2.3.1 Sequence Name  F13D2.3.1
Length (nt)  1325   Chromosome Location  X: 11185798-11187636
Chromosome . Primary Identifier  X Chromosome Location . Start  11185798
Chromosome Location . End  11187636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008737 gnrr-7 F13D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D2.3 F13D2.3 1146   X: 11185812-11185957

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D2.3.1 11185798 11187636 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252114   160   X: 11185798-11185957 Caenorhabditis elegans
Exon252115   118   X: 11186003-11186120 Caenorhabditis elegans
Exon252116   154   X: 11186166-11186319 Caenorhabditis elegans
Exon252117   349   X: 11186553-11186901 Caenorhabditis elegans
Exon252118   104   X: 11186954-11187057 Caenorhabditis elegans
Exon252119   142   X: 11187151-11187292 Caenorhabditis elegans
Exon252120   298   X: 11187339-11187636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D2.3.1 11185798 11187636 1

1 Sequence

Length
1325

1 Sequence Ontology Term

Identifier Name Description
transcript