WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.10d.1 Sequence Name  C34F6.10d.1
Length (nt)  5055   Chromosome Location  X: 11229212-11240627
Chromosome . Primary Identifier  X Chromosome Location . Start  11229212
Chromosome Location . End  11240627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007944 C34F6.10 C34F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.10d C34F6.10d 4326   X: 11229807-11229944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10d.1 11229212 11240627 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252216   733   X: 11229212-11229944 Caenorhabditis elegans
Exon252226   72   X: 11229991-11230062 Caenorhabditis elegans
Exon252232   168   X: 11230132-11230299 Caenorhabditis elegans
Exon252238   337   X: 11230355-11230691 Caenorhabditis elegans
Exon252244   78   X: 11230741-11230818 Caenorhabditis elegans
Exon252250   803   X: 11230864-11231666 Caenorhabditis elegans
Exon252256   138   X: 11231717-11231854 Caenorhabditis elegans
Exon252262   148   X: 11231906-11232053 Caenorhabditis elegans
Exon252268   968   X: 11232103-11233070 Caenorhabditis elegans
Exon252274   108   X: 11233189-11233296 Caenorhabditis elegans
Exon252280   792   X: 11233520-11234311 Caenorhabditis elegans
Exon252289   113   X: 11234508-11234620 Caenorhabditis elegans
Exon252295   380   X: 11236333-11236712 Caenorhabditis elegans
Exon252298   99   X: 11237283-11237381 Caenorhabditis elegans
Exon252302   118   X: 11240510-11240627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10d.1 11229212 11240627 -1

1 Sequence

Length
5055

1 Sequence Ontology Term

Identifier Name Description
transcript