WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34F6.10c.1 Sequence Name  C34F6.10c.1
Length (nt)  4947   Chromosome Location  X: 11229220-11240626
Chromosome . Primary Identifier  X Chromosome Location . Start  11229220
Chromosome Location . End  11240626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34F6.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007944 C34F6.10 C34F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34F6.10c C34F6.10c 4344   X: 11229807-11229944

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10c.1 11229220 11240626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252247   725   X: 11229220-11229944 Caenorhabditis elegans
Exon252252   72   X: 11229991-11230062 Caenorhabditis elegans
Exon252258   168   X: 11230132-11230299 Caenorhabditis elegans
Exon252264   337   X: 11230355-11230691 Caenorhabditis elegans
Exon252270   78   X: 11230741-11230818 Caenorhabditis elegans
Exon252276   803   X: 11230864-11231666 Caenorhabditis elegans
Exon252282   138   X: 11231717-11231854 Caenorhabditis elegans
Exon252288   148   X: 11231906-11232053 Caenorhabditis elegans
Exon252294   968   X: 11232103-11233070 Caenorhabditis elegans
Exon252300   108   X: 11233189-11233296 Caenorhabditis elegans
Exon252306   792   X: 11233520-11234311 Caenorhabditis elegans
Exon252315   113   X: 11234508-11234620 Caenorhabditis elegans
Exon252321   380   X: 11236333-11236712 Caenorhabditis elegans
Exon252328   117   X: 11240510-11240626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34F6.10c.1 11229220 11240626 -1

1 Sequence

Length
4947

1 Sequence Ontology Term

Identifier Name Description
transcript