WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A3.5.1 Sequence Name  F56A3.5.1
Length (nt)  1142   Chromosome Location  I: 5186926-5189240
Chromosome . Primary Identifier  I Chromosome Location . Start  5186926
Chromosome Location . End  5189240 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000272 bro-1 F56A3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A3.5 F56A3.5 459   I: 5186985-5187149

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A3.5.1 5186926 5189240 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11995   224   I: 5186926-5187149 Caenorhabditis elegans
Exon11996   66   I: 5187582-5187647 Caenorhabditis elegans
Exon11997   852   I: 5188389-5189240 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A3.5.1 5186926 5189240 1

1 Sequence

Length
1142

1 Sequence Ontology Term

Identifier Name Description
transcript