WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3c.2 Sequence Name  F46C3.3c.2
Length (nt)  8619   Chromosome Location  X: 11420465-11433585
Chromosome . Primary Identifier  X Chromosome Location . Start  11420465
Chromosome Location . End  11433585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3c F46C3.3c 2892   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3c.2 11420465 11433585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

40 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252963   359   X: 11420465-11420823 Caenorhabditis elegans
Exon252975   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252986   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252997   143   X: 11421490-11421632 Caenorhabditis elegans
Exon253008   140   X: 11422050-11422189 Caenorhabditis elegans
Exon253019   161   X: 11422239-11422399 Caenorhabditis elegans
Exon253030   175   X: 11422446-11422620 Caenorhabditis elegans
Exon253041   95   X: 11422702-11422796 Caenorhabditis elegans
Exon253052   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253063   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253074   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253085   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253096   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253107   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253118   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253129   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253140   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253155   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253165   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253183   789   X: 11426237-11427025 Caenorhabditis elegans
Exon253195   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253206   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253218   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253228   227   X: 11428401-11428627 Caenorhabditis elegans
Exon253233   154   X: 11428738-11428891 Caenorhabditis elegans
Exon253237   125   X: 11428940-11429064 Caenorhabditis elegans
Exon253241   195   X: 11429112-11429306 Caenorhabditis elegans
Exon253245   135   X: 11429361-11429495 Caenorhabditis elegans
Exon253249   161   X: 11429540-11429700 Caenorhabditis elegans
Exon253253   243   X: 11429894-11430136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3c.2 11420465 11433585 -1

1 Sequence

Length
8619

1 Sequence Ontology Term

Identifier Name Description
transcript