WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3h.1 Sequence Name  F46C3.3h.1
Length (nt)  3750   Chromosome Location  X: 11420743-11428150
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11428150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3h F46C3.3h 3750   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3h.1 11420743 11428150 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252968   81   X: 11420743-11420823 Caenorhabditis elegans
Exon252982   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252993   167   X: 11421273-11421439 Caenorhabditis elegans
Exon253004   143   X: 11421490-11421632 Caenorhabditis elegans
Exon253015   140   X: 11422050-11422189 Caenorhabditis elegans
Exon253026   161   X: 11422239-11422399 Caenorhabditis elegans
Exon253037   175   X: 11422446-11422620 Caenorhabditis elegans
Exon253048   95   X: 11422702-11422796 Caenorhabditis elegans
Exon253059   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253070   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253081   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253092   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253103   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253114   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253125   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253136   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253147   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253162   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253172   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253182   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253192   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253202   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253213   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253215   408   X: 11427743-11428150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3h.1 11420743 11428150 -1

1 Sequence

Length
3750

1 Sequence Ontology Term

Identifier Name Description
transcript