WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3g.1 Sequence Name  F46C3.3g.1
Length (nt)  4017   Chromosome Location  X: 11420743-11428599
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11428599 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3g F46C3.3g 4017   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3g.1 11420743 11428599 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252970   81   X: 11420743-11420823 Caenorhabditis elegans
Exon252981   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252992   167   X: 11421273-11421439 Caenorhabditis elegans
Exon253003   143   X: 11421490-11421632 Caenorhabditis elegans
Exon253014   140   X: 11422050-11422189 Caenorhabditis elegans
Exon253025   161   X: 11422239-11422399 Caenorhabditis elegans
Exon253036   175   X: 11422446-11422620 Caenorhabditis elegans
Exon253047   95   X: 11422702-11422796 Caenorhabditis elegans
Exon253058   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253069   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253080   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253091   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253102   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253113   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253124   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253135   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253146   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253161   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253171   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253181   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253191   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253201   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253212   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253222   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253225   199   X: 11428401-11428599 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3g.1 11420743 11428599 -1

1 Sequence

Length
4017

1 Sequence Ontology Term

Identifier Name Description
transcript