WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3f.1 Sequence Name  F46C3.3f.1
Length (nt)  7623   Chromosome Location  X: 11420743-11433524
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11433524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3f F46C3.3f 7623   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3f.1 11420743 11433524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

41 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252971   81   X: 11420743-11420823 Caenorhabditis elegans
Exon252980   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252991   167   X: 11421273-11421439 Caenorhabditis elegans
Exon253002   143   X: 11421490-11421632 Caenorhabditis elegans
Exon253013   140   X: 11422050-11422189 Caenorhabditis elegans
Exon253024   161   X: 11422239-11422399 Caenorhabditis elegans
Exon253035   175   X: 11422446-11422620 Caenorhabditis elegans
Exon253046   95   X: 11422702-11422796 Caenorhabditis elegans
Exon253057   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253068   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253079   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253090   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253101   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253112   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253123   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253134   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253145   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253160   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253170   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253180   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253190   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253200   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253211   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253221   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253229   227   X: 11428401-11428627 Caenorhabditis elegans
Exon253234   154   X: 11428738-11428891 Caenorhabditis elegans
Exon253238   125   X: 11428940-11429064 Caenorhabditis elegans
Exon253242   195   X: 11429112-11429306 Caenorhabditis elegans
Exon253246   135   X: 11429361-11429495 Caenorhabditis elegans
Exon253250   161   X: 11429540-11429700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3f.1 11420743 11433524 -1

1 Sequence

Length
7623

1 Sequence Ontology Term

Identifier Name Description
transcript